IL_9TT7_129

3D structure

PDB id

9TT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome of WT EBV infected human B-cells

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

9TT7|1|L5|G|5026

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TT7|1|L5|U|4988
9TT7|1|L5|C|4989
9TT7|1|L5|G|4990
9TT7|1|L5|U|4991
9TT7|1|L5|A|4992
9TT7|1|L5|C|4993
9TT7|1|L5|G|4994
*
9TT7|1|L5|U|5024
9TT7|1|L5|U|5025
9TT7|1|L5|G|5026
9TT7|1|L5|A|5027
9TT7|1|L5|A|5028
9TT7|1|L5|A|5029

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LW

60S ribosomal protein L24

Chain Ld

60S ribosomal protein L31