IL_9TV2_006
3D structure
- PDB id
- 9TV2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- CUCAGUAA*UGAACAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TV2|1|L5|C|81
9TV2|1|L5|U|82
9TV2|1|L5|C|83
9TV2|1|L5|A|84
9TV2|1|L5|G|85
9TV2|1|L5|U|86
9TV2|1|L5|A|87
9TV2|1|L5|A|88
*
9TV2|1|L5|U|96
9TV2|1|L5|G|97
9TV2|1|L5|A|98
9TV2|1|L5|A|99
9TV2|1|L5|C|100
9TV2|1|L5|A|101
9TV2|1|L5|G|102
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LL
- 60S ribosomal protein L13
- Chain LN
- 60S ribosomal protein L15
- Chain LQ
- 60S ribosomal protein L18
- Chain La
- Large ribosomal subunit protein uL15
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