IL_9TZ9_047

3D structure

PDB id

9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Empty 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

9TZ9|1|a|U|1430

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TZ9_047 not in the Motif Atlas

Homologous match to IL_7A0S_051

Geometric discrepancy: 0.4572

The information below is about IL_7A0S_051

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_08938.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

25

Unit IDs

9TZ9|1|a|C|1427
9TZ9|1|a|G|1428
9TZ9|1|a|A|1429
9TZ9|1|a|U|1430
9TZ9|1|a|G|1431
*
9TZ9|1|a|C|1592
9TZ9|1|a|U|1593
9TZ9|1|a|A|1594
9TZ9|1|a|A|1595
9TZ9|1|a|G|1596

Current chains

Chain a

23S ribosomal RNA

Nearby chains