IL_9TZ9_075

3D structure

PDB id

9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Empty 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CGAAAUUCCUUGU*ACCUG

Length

18 nucleotides

Bulged bases

9TZ9|1|a|A|1954, 9TZ9|1|a|U|1960, 9TZ9|1|a|U|1979

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TZ9|1|a|C|1950
9TZ9|1|a|G|1951
9TZ9|1|a|A|1952
9TZ9|1|a|A|1953
9TZ9|1|a|A|1954
9TZ9|1|a|U|1955
9TZ9|1|a|U|1956
9TZ9|1|a|C|1957
9TZ9|1|a|C|1958
9TZ9|1|a|U|1959
9TZ9|1|a|U|1960
9TZ9|1|a|G|1961
9TZ9|1|a|U|1962
*
9TZ9|1|a|A|1976
9TZ9|1|a|C|1977
9TZ9|1|a|C|1978
9TZ9|1|a|U|1979
9TZ9|1|a|G|1980

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain o

Large ribosomal subunit protein uL2