3D structure

PDB id
9TZE (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S Coxiella burnetii Ribosome with Doxycycline and HPFcold
Experimental method
ELECTRON MICROSCOPY
Resolution
2.48 Å

Loop

Sequence
GUACAAAG*CAGAAAAC
Length
16 nucleotides
Bulged bases
9TZE|1|A|G|1283
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9TZE|1|A|G|1243
9TZE|1|A|U|1244
9TZE|1|A|A|1245
9TZE|1|A|C|1246
9TZE|1|A|A|1247
9TZE|1|A|A|1248
9TZE|1|A|A|1249
9TZE|1|A|G|1250
*
9TZE|1|A|C|1281
9TZE|1|A|A|1282
9TZE|1|A|G|1283
9TZE|1|A|A|1284
9TZE|1|A|A|1285
9TZE|1|A|A|1286
9TZE|1|A|A|1287
9TZE|1|A|C|1288

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain G
Small ribosomal subunit protein uS7
Chain I
Small ribosomal subunit protein uS9
Chain J
Small ribosomal subunit protein uS10
Chain N
Small ribosomal subunit protein uS14

Coloring options:

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