IL_9TZE_099

3D structure

PDB id

9TZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Coxiella burnetii Ribosome with Doxycycline and HPFcold

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GCUAGGGG*CUACCAAAC

Length

17 nucleotides

Bulged bases

9TZE|1|a|G|887

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TZE|1|a|G|881
9TZE|1|a|C|882
9TZE|1|a|U|883
9TZE|1|a|A|884
9TZE|1|a|G|885
9TZE|1|a|G|886
9TZE|1|a|G|887
9TZE|1|a|G|888
*
9TZE|1|a|C|900
9TZE|1|a|U|901
9TZE|1|a|A|902
9TZE|1|a|C|903
9TZE|1|a|C|904
9TZE|1|a|A|905
9TZE|1|a|A|906
9TZE|1|a|A|907
9TZE|1|a|C|908

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain s

Large ribosomal subunit protein uL16

Chain u

Large ribosomal subunit protein bL25