3D structure

PDB id
9UWH (explore in PDB, NAKB, or RNA 3D Hub)
Description
human mitoribosome trapped by retapamulin
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CUAAACC*GAUGAAAAAUUAUAACCAAG
Length
27 nucleotides
Bulged bases
9UWH|1|A|A|1804, 9UWH|1|A|U|1807, 9UWH|1|A|A|1808, 9UWH|1|A|U|1809, 9UWH|1|A|C|1812, 9UWH|1|A|C|1813
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9UWH|1|A|C|1672
9UWH|1|A|U|1673
9UWH|1|A|A|1674
9UWH|1|A|A|1675
9UWH|1|A|A|1676
9UWH|1|A|C|1677
9UWH|1|A|C|1678
*
9UWH|1|A|G|1797
9UWH|1|A|A|1798
9UWH|1|A|U|1799
9UWH|1|A|G|1800
9UWH|1|A|A|1801
9UWH|1|A|A|1802
9UWH|1|A|A|1803
9UWH|1|A|A|1804
9UWH|1|A|A|1805
9UWH|1|A|U|1806
9UWH|1|A|U|1807
9UWH|1|A|A|1808
9UWH|1|A|U|1809
9UWH|1|A|A|1810
9UWH|1|A|A|1811
9UWH|1|A|C|1812
9UWH|1|A|C|1813
9UWH|1|A|A|1814
9UWH|1|A|A|1815
9UWH|1|A|G|1816

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 0
Large ribosomal subunit protein bL32m
Chain R
Large ribosomal subunit protein bL20m
Chain T
Large ribosomal subunit protein uL22m
Chain U
Large ribosomal subunit protein uL23m
Chain V
Large ribosomal subunit protein uL24m
Chain Y
Large ribosomal subunit protein uL29m
Chain c
Large ribosomal subunit protein mL44
Chain d
Large ribosomal subunit protein mL45
Chain i
Large ribosomal subunit protein mL51

Coloring options:

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