IL_9UWH_005
3D structure
- PDB id
- 9UWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human mitoribosome trapped by retapamulin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUG*CUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9UWH_005 not in the Motif Atlas
- Geometric match to IL_3GM7_002
- Geometric discrepancy: 0.1028
- The information below is about IL_3GM7_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 215
Unit IDs
9UWH|1|A|U|1877
9UWH|1|A|U|1878
9UWH|1|A|G|1879
*
9UWH|1|A|C|1895
9UWH|1|A|U|1896
9UWH|1|A|A|1897
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL35m
- Chain F
- Large ribosomal subunit protein uL4m
- Chain M
- Large ribosomal subunit protein uL15m
- Chain g
- Large ribosomal subunit protein mL49
- Chain i
- Large ribosomal subunit protein mL51
- Chain o
- Large ribosomal subunit protein mL63
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