IL_9UWH_018

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAG*CAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_018 not in the Motif Atlas

Geometric match to IL_8GLP_325

Geometric discrepancy: 0.2184

The information below is about IL_8GLP_325

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42997.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

23

Unit IDs

9UWH|1|A|U|2168
9UWH|1|A|A|2169
9UWH|1|A|G|2170
*
9UWH|1|A|C|2190
9UWH|1|A|A|2191
9UWH|1|A|A|2192

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain I

Large ribosomal subunit protein uL10m

Chain J

Large ribosomal subunit protein uL11m

Chain l

Large ribosomal subunit protein mL54