3D structure

PDB id
9UWH (explore in PDB, NAKB, or RNA 3D Hub)
Description
human mitoribosome trapped by retapamulin
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GUACAUG*CGAACUACUAUAC
Length
20 nucleotides
Bulged bases
9UWH|1|A|U|2882, 9UWH|1|A|A|2883, 9UWH|1|A|C|2884, 9UWH|1|A|U|2885, 9UWH|1|A|A|2888
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9UWH|1|A|G|2849
9UWH|1|A|U|2850
9UWH|1|A|A|2851
9UWH|1|A|C|2852
9UWH|1|A|A|2853
9UWH|1|A|U|2854
9UWH|1|A|G|2855
*
9UWH|1|A|C|2877
9UWH|1|A|G|2878
9UWH|1|A|A|2879
9UWH|1|A|A|2880
9UWH|1|A|C|2881
9UWH|1|A|U|2882
9UWH|1|A|A|2883
9UWH|1|A|C|2884
9UWH|1|A|U|2885
9UWH|1|A|A|2886
9UWH|1|A|U|2887
9UWH|1|A|A|2888
9UWH|1|A|C|2889

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 1
Large ribosomal subunit protein bL33m
Chain 3
Large ribosomal subunit protein bL35m
Chain P
Large ribosomal subunit protein uL18m
Chain W
Large ribosomal subunit protein bL27m
Chain p
Large ribosomal subunit protein mL62
Chain q
Large ribosomal subunit protein mL64

Coloring options:

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