IL_9UWH_056

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUAC*GCG

Length

8 nucleotides

Bulged bases

9UWH|1|A|C|3162

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_056 not in the Motif Atlas

Geometric match to IL_4JRC_003

Geometric discrepancy: 0.1818

The information below is about IL_4JRC_003

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.12

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

22

Unit IDs

9UWH|1|A|C|3148
9UWH|1|A|C|3149
9UWH|1|A|U|3150
9UWH|1|A|A|3151
9UWH|1|A|C|3152
*
9UWH|1|A|G|3161
9UWH|1|A|C|3162
9UWH|1|A|G|3163

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain E

Large ribosomal subunit protein uL3m

Chain L

Large ribosomal subunit protein uL14m

Chain Q

Large ribosomal subunit protein bL19m