3D structure

PDB id
9UWH (explore in PDB, NAKB, or RNA 3D Hub)
Description
human mitoribosome trapped by retapamulin
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
AUCACCCCCUCCCCAAU*AACAUAU
Length
24 nucleotides
Bulged bases
9UWH|1|AA|C|954, 9UWH|1|AA|C|959, 9UWH|1|AA|C|962, 9UWH|1|AA|A|966, 9UWH|1|AA|A|1041
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9UWH|1|AA|A|952
9UWH|1|AA|U|953
9UWH|1|AA|C|954
9UWH|1|AA|A|955
9UWH|1|AA|C|956
9UWH|1|AA|C|957
9UWH|1|AA|C|958
9UWH|1|AA|C|959
9UWH|1|AA|C|960
9UWH|1|AA|U|961
9UWH|1|AA|C|962
9UWH|1|AA|C|963
9UWH|1|AA|C|964
9UWH|1|AA|C|965
9UWH|1|AA|A|966
9UWH|1|AA|A|967
9UWH|1|AA|U|968
*
9UWH|1|AA|A|1036
9UWH|1|AA|A|1037
9UWH|1|AA|C|1038
9UWH|1|AA|A|1039
9UWH|1|AA|U|1040
9UWH|1|AA|A|1041
9UWH|1|AA|U|1042

Current chains

Chain AA
12S mitochondrial rRNA

Nearby chains

Chain A2
Small ribosomal subunit protein mS37
Chain AE
Small ribosomal subunit protein bS6m
Chain AJ
Small ribosomal subunit protein uS12m
Chain AL
Small ribosomal subunit protein uS15m
Chain AN
Small ribosomal subunit protein uS17m
Chain AP
Small ribosomal subunit protein bS18m
Chain AS
Small ribosomal subunit protein mS23
Chain AT
Small ribosomal subunit protein mS25
Chain AU
Small ribosomal subunit protein mS26

Coloring options:

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