IL_9UWH_078

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_078 not in the Motif Atlas

Geometric match to IL_8OI5_023

Geometric discrepancy: 0.1064

The information below is about IL_8OI5_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

9UWH|1|AA|A|982
9UWH|1|AA|C|983
9UWH|1|AA|C|984
*
9UWH|1|AA|G|1004
9UWH|1|AA|U|1005
9UWH|1|AA|U|1006

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AE

Small ribosomal subunit protein bS6m

Chain AI

Small ribosomal subunit protein uS11m

Chain AQ

MRPS21 isoform 1