IL_9UWH_089

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUGCUCAG*CCCAUG

Length

15 nucleotides

Bulged bases

9UWH|1|AA|U|1246, 9UWH|1|AA|C|1250, 9UWH|1|AA|U|1344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UWH|1|AA|C|1244
9UWH|1|AA|U|1245
9UWH|1|AA|U|1246
9UWH|1|AA|G|1247
9UWH|1|AA|C|1248
9UWH|1|AA|U|1249
9UWH|1|AA|C|1250
9UWH|1|AA|A|1251
9UWH|1|AA|G|1252
*
9UWH|1|AA|C|1340
9UWH|1|AA|C|1341
9UWH|1|AA|C|1342
9UWH|1|AA|A|1343
9UWH|1|AA|U|1344
9UWH|1|AA|G|1345

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AD

Small ribosomal subunit protein uS5m

Chain AK

Small ribosomal subunit protein uS14m

Chain AZ

Small ribosomal subunit protein mS33