IL_9UWH_090

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUA*UAG

Length

7 nucleotides

Bulged bases

9UWH|1|AA|C|1254, 9UWH|1|AA|U|1255

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_090 not in the Motif Atlas

Homologous match to IL_6CZR_153

Geometric discrepancy: 0.5355

The information below is about IL_6CZR_153

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UWH|1|AA|C|1253
9UWH|1|AA|C|1254
9UWH|1|AA|U|1255
9UWH|1|AA|A|1256
*
9UWH|1|AA|U|1337
9UWH|1|AA|A|1338
9UWH|1|AA|G|1339

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AD

Small ribosomal subunit protein uS5m

Chain AK

Small ribosomal subunit protein uS14m

Chain AZ

Small ribosomal subunit protein mS33