IL_9UWH_100

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_100 not in the Motif Atlas

Geometric match to IL_8GLP_039

Geometric discrepancy: 0.1226

The information below is about IL_8GLP_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

9UWH|1|AA|G|1489
9UWH|1|AA|U|1490
9UWH|1|AA|C|1491
*
9UWH|1|AA|G|1559
9UWH|1|AA|U|1560
9UWH|1|AA|C|1561

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain A3

Small ribosomal subunit protein mS38

Chain Ax

P/P-tRNA

Chain Az

mRNA