IL_9UWH_104

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UC*GCA

Length

5 nucleotides

Bulged bases

9UWH|1|AA|C|1539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_104 not in the Motif Atlas

Geometric match to IL_3SN2_002

Geometric discrepancy: 0.39

The information below is about IL_3SN2_002

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_05642.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

9UWH|1|AA|U|1510
9UWH|1|AA|C|1511
*
9UWH|1|AA|G|1538
9UWH|1|AA|C|1539
9UWH|1|AA|A|1540

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

Small ribosomal subunit protein mS34

Chain A3

Small ribosomal subunit protein mS38

Chain L

Large ribosomal subunit protein uL14m