IL_9VXM_020
3D structure
- PDB id
- 9VXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAA*UC
- Length
- 6 nucleotides
- Bulged bases
- 9VXM|1|A|A|2198
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9VXM_020 not in the Motif Atlas
- Homologous match to IL_6PRV_002
- Geometric discrepancy: 0.1976
- The information below is about IL_6PRV_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXM|1|A|G|2197
9VXM|1|A|A|2198
9VXM|1|A|A|2199
9VXM|1|A|A|2200
*
9VXM|1|A|U|2211
9VXM|1|A|C|2212
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein bL36m
- Chain J
- Large ribosomal subunit protein uL11m
- Chain l
- Large ribosomal subunit protein mL54
- Chain n
- Large ribosomal subunit protein mL53
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