IL_9VXM_025
3D structure
- PDB id
- 9VXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AUCUACAAUCAACCAAC*GUCAUU
- Length
- 23 nucleotides
- Bulged bases
- 9VXM|1|A|C|2393, 9VXM|1|A|A|2406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXM|1|A|A|2384
9VXM|1|A|U|2385
9VXM|1|A|C|2386
9VXM|1|A|U|2387
9VXM|1|A|A|2388
9VXM|1|A|C|2389
9VXM|1|A|A|2390
9VXM|1|A|A|2391
9VXM|1|A|U|2392
9VXM|1|A|C|2393
9VXM|1|A|A|2394
9VXM|1|A|A|2395
9VXM|1|A|C|2396
9VXM|1|A|C|2397
9VXM|1|A|A|2398
9VXM|1|A|A|2399
9VXM|1|A|C|2400
*
9VXM|1|A|G|2403
9VXM|1|A|U|2404
9VXM|1|A|C|2405
9VXM|1|A|A|2406
9VXM|1|A|U|2407
9VXM|1|A|U|2408
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 5
- Large ribosomal subunit protein mL37
- Chain D
- Large ribosomal subunit protein uL2m
- Chain s
- Large ribosomal subunit protein mL65
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