IL_9VXM_031
3D structure
- PDB id
- 9VXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCAAAUCUUA*UUCAGC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXM|1|A|G|2478
9VXM|1|A|C|2479
9VXM|1|A|A|2480
9VXM|1|A|A|2481
9VXM|1|A|A|2482
9VXM|1|A|U|2483
9VXM|1|A|C|2484
9VXM|1|A|U|2485
9VXM|1|A|U|2486
9VXM|1|A|A|2487
*
9VXM|1|A|U|2648
9VXM|1|A|U|2649
9VXM|1|A|C|2650
9VXM|1|A|A|2651
9VXM|1|A|G|2652
9VXM|1|A|C|2653
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain E
- Large ribosomal subunit protein uL3m
- Chain L
- Large ribosomal subunit protein uL14m
- Chain Q
- Large ribosomal subunit protein bL19m
Coloring options: