IL_9VXM_083
3D structure
- PDB id
- 9VXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUA*UG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9VXM_083 not in the Motif Atlas
- Geometric match to IL_3WBM_004
- Geometric discrepancy: 0.3868
- The information below is about IL_3WBM_004
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_18188.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9VXM|1|AA|C|1020
9VXM|1|AA|U|1021
9VXM|1|AA|A|1022
*
9VXM|1|AA|U|1029
9VXM|1|AA|G|1030
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AE
- Small ribosomal subunit protein bS6m
- Chain AP
- Small ribosomal subunit protein bS18m
- Chain C
- Small ribosomal subunit protein bS21m
- Chain G
- Small ribosomal subunit protein mS37
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