IL_9VXM_099
3D structure
- PDB id
- 9VXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GCUACAAAG
- Length
- 11 nucleotides
- Bulged bases
- 9VXM|1|AA|C|1293, 9VXM|1|AA|A|1296
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXM|1|AA|C|1278
9VXM|1|AA|C|1279
*
9VXM|1|AA|G|1289
9VXM|1|AA|C|1290
9VXM|1|AA|U|1291
9VXM|1|AA|A|1292
9VXM|1|AA|C|1293
9VXM|1|AA|A|1294
9VXM|1|AA|A|1295
9VXM|1|AA|A|1296
9VXM|1|AA|G|1297
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AB
- Small ribosomal subunit protein uS2m
- Chain AD
- Small ribosomal subunit protein uS5m
- Chain AE
- Small ribosomal subunit protein bS6m
- Chain AG
- Small ribosomal subunit protein uS9m
- Chain AS
- Small ribosomal subunit protein mS23
- Chain C
- Small ribosomal subunit protein bS21m
- Chain G
- Small ribosomal subunit protein mS37
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