IL_9VXN_210
3D structure
- PDB id
- 9VXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.51 Å
Loop
- Sequence
- AGAGUG(PSU)UCAAAGCAG*CUGGAU
- Length
- 22 nucleotides
- Bulged bases
- 9VXN|1|S2|G|821
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXN|1|S2|A|816
9VXN|1|S2|G|817
9VXN|1|S2|A|818
9VXN|1|S2|G|819
9VXN|1|S2|U|820
9VXN|1|S2|G|821
9VXN|1|S2|PSU|822
9VXN|1|S2|U|823
9VXN|1|S2|C|824
9VXN|1|S2|A|825
9VXN|1|S2|A|826
9VXN|1|S2|A|827
9VXN|1|S2|G|828
9VXN|1|S2|C|829
9VXN|1|S2|A|830
9VXN|1|S2|G|831
*
9VXN|1|S2|C|843
9VXN|1|S2|U|844
9VXN|1|S2|G|845
9VXN|1|S2|G|846
9VXN|1|S2|A|847
9VXN|1|S2|U|848
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SE
- Small ribosomal subunit protein eS4, X isoform
- Chain SJ
- Small ribosomal subunit protein uS4
- Chain SY
- Small ribosomal subunit protein eS24
Coloring options: