IL_9WNR_045

3D structure

PDB id

9WNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

9WNR|1|A|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9WNR_045 not in the Motif Atlas

Homologous match to IL_6CZR_152

Geometric discrepancy: 0.2847

The information below is about IL_6CZR_152

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNR|1|A|G|1048
9WNR|1|A|U|1049
9WNR|1|A|G|1050
*
9WNR|1|A|C|1208
9WNR|1|A|C|1209

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14