IL_9WNR_057

3D structure

PDB id

9WNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CCGCCC*GUAACAAG

Length

14 nucleotides

Bulged bases

9WNR|1|A|C|1400, 9WNR|1|A|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNR|1|A|C|1399
9WNR|1|A|C|1400
9WNR|1|A|G|1401
9WNR|1|A|C|1402
9WNR|1|A|C|1403
9WNR|1|A|C|1404
*
9WNR|1|A|G|1497
9WNR|1|A|U|1498
9WNR|1|A|A|1499
9WNR|1|A|A|1500
9WNR|1|A|C|1501
9WNR|1|A|A|1502
9WNR|1|A|A|1503
9WNR|1|A|G|1504

Current chains

Chain A

16S rRNA

Nearby chains

Chain Y

Transfer RNA; tRNA

Chain b

Large subunit ribosomal RNA; LSU rRNA

Chain x

mRNA