IL_9WNR_144

3D structure

PDB id

9WNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNR|1|b|U|1851
9WNR|1|b|U|1852
9WNR|1|b|A|1853
9WNR|1|b|A|1854
9WNR|1|b|U|1855
9WNR|1|b|U|1856
9WNR|1|b|G|1857
9WNR|1|b|A|1858
9WNR|1|b|U|1859
9WNR|1|b|G|1860
*
9WNR|1|b|U|1882
9WNR|1|b|U|1883
9WNR|1|b|G|1884
9WNR|1|b|A|1885
9WNR|1|b|U|1886
9WNR|1|b|C|1887
9WNR|1|b|G|1888
9WNR|1|b|A|1889
9WNR|1|b|A|1890
9WNR|1|b|G|1891

Current chains

Chain b

23S rRNA

Nearby chains

Chain X

Transfer RNA; tRNA