IL_9WNR_155

3D structure

PDB id

9WNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GCCUUG*UAAUGUU

Length

13 nucleotides

Bulged bases

9WNR|1|b|A|2183

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNR|1|b|G|2102
9WNR|1|b|C|2103
9WNR|1|b|C|2104
9WNR|1|b|U|2105
9WNR|1|b|U|2106
9WNR|1|b|G|2107
*
9WNR|1|b|U|2182
9WNR|1|b|A|2183
9WNR|1|b|A|2184
9WNR|1|b|U|2185
9WNR|1|b|G|2186
9WNR|1|b|U|2187
9WNR|1|b|U|2188

Current chains

Chain b

23S rRNA

Nearby chains

Chain h

50S ribosomal protein L9