IL_9WNR_158

3D structure

PDB id

9WNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNR|1|b|G|2124
9WNR|1|b|G|2125
9WNR|1|b|A|2126
9WNR|1|b|G|2127
9WNR|1|b|G|2128
*
9WNR|1|b|C|2160
9WNR|1|b|C|2161
9WNR|1|b|G|2162
9WNR|1|b|A|2163
9WNR|1|b|C|2164
9WNR|1|b|C|2165
9WNR|1|b|U|2166
9WNR|1|b|U|2167
9WNR|1|b|G|2168
9WNR|1|b|A|2169
9WNR|1|b|A|2170
9WNR|1|b|A|2171
9WNR|1|b|U|2172
9WNR|1|b|A|2173
9WNR|1|b|C|2174

Current chains

Chain b

23S rRNA

Nearby chains

Chain X

Transfer RNA; tRNA