3D structure

PDB id
9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.48 Å

Loop

Sequence
GCUCCC*GCCC
Length
10 nucleotides
Bulged bases
9WW4|1|AA|U|171, 9WW4|1|AA|C|264
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW4|1|AA|G|169
9WW4|1|AA|C|170
9WW4|1|AA|U|171
9WW4|1|AA|C|172
9WW4|1|AA|C|173
9WW4|1|AA|C|174
*
9WW4|1|AA|G|263
9WW4|1|AA|C|264
9WW4|1|AA|C|265
9WW4|1|AA|C|266

Current chains

Chain AA
28S rRNA (3773-MER)

Nearby chains

Chain AN
60S ribosomal protein L13
Chain Aj
60S ribosomal protein L35

Coloring options:

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