IL_9WW4_012

3D structure

PDB id

9WW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

CCGCUCGUGG*CGGCG

Length

15 nucleotides

Bulged bases

9WW4|1|AA|C|185, 9WW4|1|AA|G|188

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW4|1|AA|C|180
9WW4|1|AA|C|181
9WW4|1|AA|G|182
9WW4|1|AA|C|183
9WW4|1|AA|U|184
9WW4|1|AA|C|185
9WW4|1|AA|G|186
9WW4|1|AA|U|187
9WW4|1|AA|G|188
9WW4|1|AA|G|189
*
9WW4|1|AA|C|252
9WW4|1|AA|G|253
9WW4|1|AA|G|254
9WW4|1|AA|C|255
9WW4|1|AA|G|256

Current chains

Chain AA

28S rRNA (3773-MER)

Nearby chains

Chain AN

60S ribosomal protein L13

Chain Aj

60S ribosomal protein L35

Chain Al

60S ribosomal protein L37