IL_9WW4_026
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- GUGUCG*CGACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW4_026 not in the Motif Atlas
- Homologous match to IL_8GLP_029
- Geometric discrepancy: 0.5829
- The information below is about IL_8GLP_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31545.4
- Basepair signature
- cWW-L-R-L-cWW-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
9WW4|1|AA|G|491
9WW4|1|AA|U|492
9WW4|1|AA|G|493
9WW4|1|AA|U|494
9WW4|1|AA|C|495
9WW4|1|AA|G|496
*
9WW4|1|AA|C|658
9WW4|1|AA|G|659
9WW4|1|AA|A|660
9WW4|1|AA|C|661
9WW4|1|AA|C|662
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AF
- Large ribosomal subunit protein uL4
- Chain AS
- 60S ribosomal protein L18
Coloring options: