IL_9WW4_044

3D structure

PDB id

9WW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

CGGG*CGUG

Length

8 nucleotides

Bulged bases

9WW4|1|AA|G|1359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW4|1|AA|C|1357
9WW4|1|AA|G|1358
9WW4|1|AA|G|1359
9WW4|1|AA|G|1360
*
9WW4|1|AA|C|1379
9WW4|1|AA|G|1380
9WW4|1|AA|U|1381
9WW4|1|AA|G|1382

Current chains

Chain AA

28S rRNA (3773-MER)

Nearby chains

Chain AF

Large ribosomal subunit protein uL4

Chain AN

60S ribosomal protein L13

Chain AP

60S ribosomal protein L15

Chain Ac

Large ribosomal subunit protein uL15