IL_9WW4_068

3D structure

PDB id

9WW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

UCUUGGGG*CUCAA

Length

13 nucleotides

Bulged bases

9WW4|1|AA|U|1757

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW4|1|AA|U|1754
9WW4|1|AA|C|1755
9WW4|1|AA|U|1756
9WW4|1|AA|U|1757
9WW4|1|AA|G|1758
9WW4|1|AA|G|1759
9WW4|1|AA|G|1760
9WW4|1|AA|G|1761
*
9WW4|1|AA|C|1772
9WW4|1|AA|U|1773
9WW4|1|AA|C|1774
9WW4|1|AA|A|1775
9WW4|1|AA|A|1776

Current chains

Chain AA

28S rRNA (3773-MER)

Nearby chains

Chain AG

Large ribosomal subunit protein uL18

Chain AL

Ribosomal protein uL16-like