IL_9WW4_097
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- AACAA(OMU)G*C(PSU)A(PSU)
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW4_097 not in the Motif Atlas
- Homologous match to IL_9H3G_083
- Geometric discrepancy: 0.0635
- The information below is about IL_9H3G_083
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89862.4
- Basepair signature
- cWW-L-tHS-L-R-L-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
9WW4|1|AA|A|2832
9WW4|1|AA|A|2833
9WW4|1|AA|C|2834
9WW4|1|AA|A|2835
9WW4|1|AA|A|2836
9WW4|1|AA|OMU|2837
9WW4|1|AA|G|2838
*
9WW4|1|AA|C|3850
9WW4|1|AA|PSU|3851
9WW4|1|AA|A|3852
9WW4|1|AA|PSU|3853
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AE
- Large ribosomal subunit protein uL3
- Chain AR
- 60S ribosomal protein L17
- Chain Af
- 60S ribosomal protein L31
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