IL_9WW4_121
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- GGGGGCGAGCCCCGAGGGGCUCUCGCUUCUGGCGCCAAG*CGAC
- Length
- 43 nucleotides
- Bulged bases
- 9WW4|1|AA|C|4096, 9WW4|1|AA|G|4099, 9WW4|1|AA|C|4103, 9WW4|1|AA|G|4104, 9WW4|1|AA|G|4106, 9WW4|1|AA|G|4107, 9WW4|1|AA|G|4108, 9WW4|1|AA|G|4109, 9WW4|1|AA|G|4115, 9WW4|1|AA|C|4116, 9WW4|1|AA|U|4117, 9WW4|1|AA|U|4118, 9WW4|1|AA|C|4119, 9WW4|1|AA|U|4120, 9WW4|1|AA|G|4121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW4|1|AA|G|4091
9WW4|1|AA|G|4092
9WW4|1|AA|G|4093
9WW4|1|AA|G|4094
9WW4|1|AA|G|4095
9WW4|1|AA|C|4096
9WW4|1|AA|G|4097
9WW4|1|AA|A|4098
9WW4|1|AA|G|4099
9WW4|1|AA|C|4100
9WW4|1|AA|C|4101
9WW4|1|AA|C|4102
9WW4|1|AA|C|4103
9WW4|1|AA|G|4104
9WW4|1|AA|A|4105
9WW4|1|AA|G|4106
9WW4|1|AA|G|4107
9WW4|1|AA|G|4108
9WW4|1|AA|G|4109
9WW4|1|AA|C|4110
9WW4|1|AA|U|4111
9WW4|1|AA|C|4112
9WW4|1|AA|U|4113
9WW4|1|AA|C|4114
9WW4|1|AA|G|4115
9WW4|1|AA|C|4116
9WW4|1|AA|U|4117
9WW4|1|AA|U|4118
9WW4|1|AA|C|4119
9WW4|1|AA|U|4120
9WW4|1|AA|G|4121
9WW4|1|AA|G|4122
9WW4|1|AA|C|4123
9WW4|1|AA|G|4124
9WW4|1|AA|C|4125
9WW4|1|AA|C|4126
9WW4|1|AA|A|4127
9WW4|1|AA|A|4128
9WW4|1|AA|G|4129
*
9WW4|1|AA|C|4155
9WW4|1|AA|G|4156
9WW4|1|AA|A|4157
9WW4|1|AA|C|4158
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AD
- 60S ribosomal protein L8
- Chain AJ
- 60S ribosomal protein L7a
- Chain AZ
- 60S ribosomal protein L23a
- Chain Ab
- 60S ribosomal protein L27
- Chain Ae
- 60S ribosomal protein L30
- Chain Ai
- 60S ribosomal protein L34
- Chain Ar
- 60S ribosomal protein L37a
Coloring options: