IL_9WW4_131
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW4_131 not in the Motif Atlas
- Homologous match to IL_8GLP_145
- Geometric discrepancy: 0.0574
- The information below is about IL_8GLP_145
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.5
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
9WW4|1|AA|C|4412
9WW4|1|AA|C|4413
9WW4|1|AA|A|4414
9WW4|1|AA|A|4415
9WW4|1|AA|G|4416
*
9WW4|1|AA|C|4426
9WW4|1|AA|G|4427
9WW4|1|AA|A|4428
9WW4|1|AA|C|4429
9WW4|1|AA|G|4430
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AL
- Ribosomal protein uL16-like
- Chain Ao
- Ubiquitin-60S ribosomal protein L40
Coloring options: