IL_9WW4_212

3D structure

PDB id

9WW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

CGC*GAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9WW4_212 not in the Motif Atlas

Homologous match to IL_9H3G_195

Geometric discrepancy: 0.3523

The information below is about IL_9H3G_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW4|1|BA|C|877
9WW4|1|BA|G|878
9WW4|1|BA|C|879
*
9WW4|1|BA|G|907
9WW4|1|BA|A|908
9WW4|1|BA|G|909

Current chains

Chain BA

18S rRNA (1740-MER)

Nearby chains

Chain AT

60S ribosomal protein L19

Chain BG

40S ribosomal protein S7