3D structure

PDB id
9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.48 Å

Loop

Sequence
GACAGGA*UUC
Length
10 nucleotides
Bulged bases
9WW4|1|BA|G|1285, 9WW4|1|BA|G|1286
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW4|1|BA|G|1281
9WW4|1|BA|A|1282
9WW4|1|BA|C|1283
9WW4|1|BA|A|1284
9WW4|1|BA|G|1285
9WW4|1|BA|G|1286
9WW4|1|BA|A|1287
*
9WW4|1|BA|U|1314
9WW4|1|BA|U|1315
9WW4|1|BA|C|1316

Current chains

Chain BA
18S rRNA (1740-MER)

Nearby chains

Chain BI
40S ribosomal protein S10
Chain BY
40S ribosomal protein S12
Chain Bg
Ubiquitin-40S ribosomal protein S27a

Coloring options:

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