IL_9WW4_250

3D structure

PDB id

9WW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW4|1|BA|G|1604
9WW4|1|BA|G|1605
9WW4|1|BA|G|1606
9WW4|1|BA|A|1607
9WW4|1|BA|U|1608
9WW4|1|BA|C|1609
9WW4|1|BA|G|1610
*
9WW4|1|BA|C|1629
9WW4|1|BA|A|1630
9WW4|1|BA|U|1631
9WW4|1|BA|G|1632
9WW4|1|BA|A|1633
9WW4|1|BA|A|1634
9WW4|1|BA|C|1635

Current chains

Chain BA

18S rRNA (1740-MER)

Nearby chains

Chain BF

40S ribosomal protein S5

Chain BM

40S ribosomal protein S18

Chain BN

Small ribosomal subunit protein eS19