3D structure

PDB id
9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome delta eL41 non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
CCGCUCGUGG*CGGCG
Length
15 nucleotides
Bulged bases
9WW6|1|AA|C|185, 9WW6|1|AA|G|186, 9WW6|1|AA|U|187, 9WW6|1|AA|G|188
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW6|1|AA|C|180
9WW6|1|AA|C|181
9WW6|1|AA|G|182
9WW6|1|AA|C|183
9WW6|1|AA|U|184
9WW6|1|AA|C|185
9WW6|1|AA|G|186
9WW6|1|AA|U|187
9WW6|1|AA|G|188
9WW6|1|AA|G|189
*
9WW6|1|AA|C|252
9WW6|1|AA|G|253
9WW6|1|AA|G|254
9WW6|1|AA|C|255
9WW6|1|AA|G|256

Current chains

Chain AA
28S rRNA (3773-MER)

Nearby chains

Chain AN
60S ribosomal protein L13

Coloring options:

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