IL_9WW6_034

3D structure

PDB id

9WW6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome delta eL41 non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

9WW6|1|AA|A|932, 9WW6|1|AA|G|933, 9WW6|1|AA|C|934, 9WW6|1|AA|A|935, 9WW6|1|AA|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW6|1|AA|A|732
9WW6|1|AA|A|733
9WW6|1|AA|G|734
9WW6|1|AA|G|735
*
9WW6|1|AA|C|928
9WW6|1|AA|A|929
9WW6|1|AA|G|930
9WW6|1|AA|C|931
9WW6|1|AA|A|932
9WW6|1|AA|G|933
9WW6|1|AA|C|934
9WW6|1|AA|A|935
9WW6|1|AA|C|936
9WW6|1|AA|U|937

Current chains

Chain AA

28S rRNA (3773-MER)

Nearby chains

Chain AF

Large ribosomal subunit protein uL4

Chain AO

60S ribosomal protein L14

Chain AU

60S ribosomal protein L18a