3D structure

PDB id
9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome delta eL41 non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
GGCGGAC*GUGCGCC
Length
14 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW6|1|AA|G|1170
9WW6|1|AA|G|1171
9WW6|1|AA|C|1172
9WW6|1|AA|G|1173
9WW6|1|AA|G|1174
9WW6|1|AA|A|1175
9WW6|1|AA|C|1176
*
9WW6|1|AA|G|1185
9WW6|1|AA|U|1186
9WW6|1|AA|G|1187
9WW6|1|AA|C|1188
9WW6|1|AA|G|1189
9WW6|1|AA|C|1190
9WW6|1|AA|C|1191

Current chains

Chain AA
28S rRNA (3773-MER)

Nearby chains

Chain AB
5S ribosomal RNA; 5S rRNA
Chain AG
Large ribosomal subunit protein uL18

Coloring options:

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