IL_9WW6_070

3D structure

PDB id

9WW6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome delta eL41 non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GUCUUGGGG*CUCAAC

Length

15 nucleotides

Bulged bases

9WW6|1|AA|U|1757

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW6|1|AA|G|1753
9WW6|1|AA|U|1754
9WW6|1|AA|C|1755
9WW6|1|AA|U|1756
9WW6|1|AA|U|1757
9WW6|1|AA|G|1758
9WW6|1|AA|G|1759
9WW6|1|AA|G|1760
9WW6|1|AA|G|1761
*
9WW6|1|AA|C|1772
9WW6|1|AA|U|1773
9WW6|1|AA|C|1774
9WW6|1|AA|A|1775
9WW6|1|AA|A|1776
9WW6|1|AA|C|1777

Current chains

Chain AA

28S rRNA (3773-MER)

Nearby chains

Chain AG

Large ribosomal subunit protein uL18

Chain AL

Ribosomal protein uL16-like

Chain AM

60S ribosomal protein L11