IL_9WW6_079
3D structure
- PDB id
- 9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome delta eL41 non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- GACCCCAGAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 9WW6|1|AA|C|1935, 9WW6|1|AA|A|2041, 9WW6|1|AA|U|2044, 9WW6|1|AA|G|2045
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW6|1|AA|G|1933
9WW6|1|AA|A|1934
9WW6|1|AA|C|1935
9WW6|1|AA|C|1936
9WW6|1|AA|C|1937
9WW6|1|AA|C|1938
9WW6|1|AA|A|1939
9WW6|1|AA|G|1940
9WW6|1|AA|A|1941
9WW6|1|AA|A|1942
9WW6|1|AA|A|1943
9WW6|1|AA|A|1944
*
9WW6|1|AA|U|2038
9WW6|1|AA|G|2039
9WW6|1|AA|A|2040
9WW6|1|AA|A|2041
9WW6|1|AA|A|2042
9WW6|1|AA|A|2043
9WW6|1|AA|U|2044
9WW6|1|AA|G|2045
9WW6|1|AA|G|2046
9WW6|1|AA|A|2047
9WW6|1|AA|U|2048
9WW6|1|AA|G|2049
9WW6|1|AA|G|2050
9WW6|1|AA|C|2051
9WW6|1|AA|G|2052
9WW6|1|AA|C|2053
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AB
- 5S ribosomal RNA; 5S rRNA
- Chain AE
- Large ribosomal subunit protein uL3
- Chain AL
- Ribosomal protein uL16-like
- Chain AQ
- 60S ribosomal protein L13a
- Chain Ah
- 60S ribosomal protein L35a
- Chain Ao
- Ubiquitin-60S ribosomal protein L40
Coloring options: