3D structure

PDB id
9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome delta eL41 non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
CGC*GGUG
Length
7 nucleotides
Bulged bases
9WW6|1|AA|G|2343
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW6|1|AA|C|2290
9WW6|1|AA|G|2291
9WW6|1|AA|C|2292
*
9WW6|1|AA|G|2342
9WW6|1|AA|G|2343
9WW6|1|AA|U|2344
9WW6|1|AA|G|2345

Current chains

Chain AA
28S rRNA (3773-MER)

Nearby chains

Chain AC
5.8S ribosomal RNA; 5.8S rRNA
Chain AF
Large ribosomal subunit protein uL4
Chain Ac
Large ribosomal subunit protein uL15
Chain Ag
60S ribosomal protein L32
Chain As
60S ribosomal protein L28

Coloring options:

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