IL_9WW6_086

3D structure

PDB id

9WW6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome delta eL41 non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GUAGU(A2M)(OMG)*CGAAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M, OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW6|1|AA|G|2358
9WW6|1|AA|U|2359
9WW6|1|AA|A|2360
9WW6|1|AA|G|2361
9WW6|1|AA|U|2362
9WW6|1|AA|A2M|2363
9WW6|1|AA|OMG|2364
*
9WW6|1|AA|C|3858
9WW6|1|AA|G|3859
9WW6|1|AA|A|3860
9WW6|1|AA|A|3861
9WW6|1|AA|A|3862
9WW6|1|AA|C|3863

Current chains

Chain AA

28S rRNA (3773-MER)

Nearby chains

Chain AF

Large ribosomal subunit protein uL4

Chain AR

60S ribosomal protein L17