IL_9WW6_182

3D structure

PDB id

9WW6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome delta eL41 non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GGAUAAC*GCUAA(OMU)A(OMC)

Length

15 nucleotides

Bulged bases

9WW6|1|BA|OMU|172

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW6|1|BA|G|145
9WW6|1|BA|G|146
9WW6|1|BA|A|147
9WW6|1|BA|U|148
9WW6|1|BA|A|149
9WW6|1|BA|A|150
9WW6|1|BA|C|151
*
9WW6|1|BA|G|167
9WW6|1|BA|C|168
9WW6|1|BA|U|169
9WW6|1|BA|A|170
9WW6|1|BA|A|171
9WW6|1|BA|OMU|172
9WW6|1|BA|A|173
9WW6|1|BA|OMC|174

Current chains

Chain BA

18S rRNA (1740-MER)

Nearby chains

Chain BW

40S ribosomal protein S6

Chain Bc

40S ribosomal protein S24