3D structure

PDB id
9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome delta eL41 non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
GU(PSU)(A2M)AAA*UC
Length
9 nucleotides
Bulged bases
9WW6|1|BA|A2M|668
QA status
Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW6|1|BA|G|665
9WW6|1|BA|U|666
9WW6|1|BA|PSU|667
9WW6|1|BA|A2M|668
9WW6|1|BA|A|669
9WW6|1|BA|A|670
9WW6|1|BA|A|671
*
9WW6|1|BA|U|1161
9WW6|1|BA|C|1162

Current chains

Chain BA
18S rRNA (1740-MER)

Nearby chains

Chain BQ
40S ribosomal protein S23
Chain BR
40S ribosomal protein S26

Coloring options:

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