3D structure

PDB id
9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome delta eL41 non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
CC(PSU)G*CGCG
Length
8 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW6|1|BA|C|1230
9WW6|1|BA|C|1231
9WW6|1|BA|PSU|1232
9WW6|1|BA|G|1233
*
9WW6|1|BA|C|1525
9WW6|1|BA|G|1526
9WW6|1|BA|C|1527
9WW6|1|BA|G|1528

Current chains

Chain BA
18S rRNA (1740-MER)

Nearby chains

Chain BK
40S ribosomal protein S15
Chain BL
40S ribosomal protein S16
Chain BM
40S ribosomal protein S18
Chain BN
Small ribosomal subunit protein eS19

Coloring options:

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