3D structure

PDB id
9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome delta eL41 non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
(PSU)GG*CGA
Length
6 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW6|1|BA|PSU|1347
9WW6|1|BA|G|1348
9WW6|1|BA|G|1349
*
9WW6|1|BA|C|1380
9WW6|1|BA|G|1381
9WW6|1|BA|A|1382

Current chains

Chain BA
18S rRNA (1740-MER)

Nearby chains

Chain BC
Small ribosomal subunit protein uS2
Chain BE
40S ribosomal protein S3
Chain BV
40S ribosomal protein S2
Chain Bh
40S ribosomal protein S17

Coloring options:

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